You should receive the message: The operation completed successfully.
Restart Windows to complete this operation. <---You may not get this line.
Do you want to restart the computer now (Y/N)? <---You may not get this line.
Go ahead and do so if prompted. Let me know what errors if any come up. If you do get errors, please zip/attach your CBS.log
Thank you for all your help on this. I ran into an issue with a containment folder that was created by Comodo when it was on my system and I ended up reinstalling Windows 7.
I installed IE11 straightaway after Windows 7 before any updates and it worked, so it is resolved.